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Terminal-Repeat Retrotransposons with GAG Domain in Plant Genomes: A New Testimony on the Complex World of Transposable Elements ArchiMer
Chaparro, Cristian; Gayraud, Thomas; De Souza, Rogerio Fernandes; Domingues, Douglas Silva; Akaffou, Selastique; Laforga Vanzela, Andre Luis; De Kochko, Alexandre; Rigoreau, Michel; Crouzillat, Dominique; Hamon, Serge; Hamon, Perla; Guyot, Romain.
A novel structure of nonautonomous long terminal repeat (LTR) retrotransposons called terminal repeat with GAG domain (TR-GAG) has been described in plants, both in monocotyledonous, dicotyledonous and basal angiosperm genomes. TR-GAGs are relatively short elements in length (<4 kb) showing the typical features of LTR-retrotransposons. However, they carry only one open reading frame coding for the GAG precursor protein involved for instance in transposition, the assembly, and the packaging of the element into the virus-like particle. GAG precursors show similarities with both Copia and Gypsy GAG proteins, suggesting evolutionary relationships of TR-GAG elements with both families. Despite the lack of the enzymatic machinery required for their mobility,...
Tipo: Text Palavras-chave: Nonautonomous elements; LTR-retrotransposons; GAG; Conservation in plant genomes.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00615/72715/71715.pdf
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